Jens Allmer

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Full Name

Allmer, Jens

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Allmer, J.
Allmer, J

Main Affiliation

04.03. Department of Molecular Biology and Genetics

ORCID

0000-0002-2164-7335

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Researcher ID

E-2335-2016

Scopus Author ID

24821311300

Country

Turkey

Status

Former Staff

	Issue Date	Title	Author(s)
1	Oct-2011	Algorithms for the de novo sequencing of peptides from tandem mass spectra	Allmer, Jens
2	2017	AltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAs	Kochetov, Alex V.; Allmer, Jens ; Klimenko, Alexandra I.; Zuraev, Bulat S.; Matushkin, Yury G.; Lashin, Sergey A.
3	2021	Antiviral microRNA expression signatures are altered in subacute sclerosing panencephalitis	Tüfekçi, Kemal Uğur; Allmer, Jens ; Çarman, Kürşat Bora; Bayram, Erhan; Topçu, Yasemin; Hız, Semra; Genç, Şermin; Yiş, Uluç
4	2013	Can MiRBase provide positive data for machine learning for the detection of MiRNA hairpins?	Demirci, Müşerref Duygu Saçar; Hamzeiy, Hamid; Allmer, Jens
5	Dec-2017	Categorization of species based on their microRNAs employing sequence motifs, information-theoretic sequence feature extraction, and k-mers	Yousef, Malik; Nigatu, Dawit; Levy, Dalit; Allmer, Jens ; Henkel, Werner
6	2014	Computational and bioinformatics methods for microRNA gene prediction	Allmer, Jens
7	2012	Computational methods for ab initio detection of microRNAs	Allmer, Jens ; Yousef, Malik
8	2014	Computational methods for microRNA target prediction	Hamzeiy, Hamid; Yousef, Malik; Allmer, Jens
9	Oct-2014	Computational prediction of MicroRNAs from toxoplasma gondii potentially regulating the hosts' gene expression	Saçar, Müşerref Duygu; Bağcı, Caner; Allmer, Jens
10	2017	Delineating the impact of machine learning elements in pre-microRNA detection	Saçar Demirci, Müşerref Duygu; Allmer, Jens
11	Dec-2013	Determining the C-terminal amino acid of a peptide from MS/MS data	Allmer, Jens
12	Jun-2013	Development of EST-SSR markers for diversity and breeding studies in opium poppy	Şelale, Hatice ; Çelik, İbrahim; Gültekin, Visam; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne
13	Feb-2017	Development of genomic simple sequence repeat markers in faba bean by next-generation sequencing	Abuzayed, Mazen A.; Göktay, Mehmet; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne
14	Aug-2014	Development of genomic simple sequence repeat markers in opium poppy by next-generation sequencing	Çelik, İbrahim; Gültekin, Visam; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne
15	2018	Development of simple sequence repeat markers in hazelnut (Corylus avellana L.) by next-generation sequencing and discrimination of Turkish hazelnut cultivars	Özturk, Süleyman Can; Göktay, Mehmet; Allmer, Jens ; Doğanlar, Sami ; Frary, Anne
16	2020	DNMSO; an ontology for representing de novo sequencing results from Tandem-MS data	Takan, Savaş ; Allmer, Jens
17	Sep-2014	EPO mediates neurotrophic, neuroprotective, anti-oxidant, and anti-apoptotic effects via downregulation of miR-451 and miR-885-5p in SH-SY5Y neuron-like cells	Alural, Begüm; Duran, Gizem Ayna; Tüfekçi, Kemal Uğur; Allmer, Jens ; Onkal, Zeynep; Tunalı, Doğa; Genç, Kürşad; Genç, Şermin
18	Jan-2012	Existing bioinformatics tools for the quantitation of post-translational modifications	Allmer, Jens
19	Jan-2018	The expressed MicroRNA-mRNA interactions of Toxoplasma gondii	Acar, İlhan Erkin; Saçar Demirci, Müşerref Duygu; Groß, Uwe; Allmer, Jens
20	2016	Feature selection has a large impact on one-class classification accuracy for micrornas in plants	Yousef, Malik; Demirci, Müşerref Duygu Saçar; Khalifa, Waleed; Allmer, Jens

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