Please use this identifier to cite or link to this item: https://hdl.handle.net/11147/10450
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dc.contributor.authorÖzdemir, Özgün O.tr
dc.contributor.authorSoyer, Ferdatr
dc.date.accessioned2021-01-24T18:43:13Z-
dc.date.available2021-01-24T18:43:13Z-
dc.date.issued2020-
dc.identifier.issn2470-1343-
dc.identifier.urihttps://doi.org/10.1021/acsomega.0c00703-
dc.identifier.urihttps://hdl.handle.net/10450-
dc.description.abstractPseudomonas aeruginosa, a widely distributed opportunistic pathogen, is an important threat to human health for causing serious infections worldwide. Due to its antibiotic resistance and virulence factors, it is so difficult to combat this bacterium; thus, new antimicrobial agents are in search. 3-Hydroxyphenylacetic acid (3-HPAA), which is a phenolic acid mostly found in olive oil wastewater, can be a promising candidate with its dose-dependent antimicrobial properties. Elucidating the molecular mechanism of action is crucial for future examinations and the presentation of 3-HPAA as a new agent. In this study, the antimicrobial activity of 3-HPAA on P. aeruginosa and its action mechanism was investigated via shot-gun proteomics. The data, which are available via ProteomeXchange with identifier PXDO16243, were examined by STRING analysis to determine the interaction networks of proteins. KEGG Pathway enrichment analysis via the DAVID bioinformatics tool was also performed to investigate the metabolic pathways that undetected and newly detected groups of the proteins. The results displayed remarkable changes after 3-HPAA exposure in the protein profile of P. aeruginosa related to DNA replication and repair, RNA modifications, ribosomes and proteins, cell envelope, oxidative stress, as well as nutrient availability. 3-HPAA showed its antimicrobial action on P. aeruginosa by affecting multiple bacterial processes; hence, it could be categorized as a multitarget antimicrobial agent.en_US
dc.description.sponsorshipIzmir Institute of Technology Research Fund [2014IYTE22]en_US
dc.description.sponsorshipThe authors thank Prof. Dr. Talat Yalcin for generously providing his expertise and support for LC-ESI-MS/MS and MASCOT analyses. This work was funded by the Izmir Institute of Technology Research Fund (Project #2014IYTE22) to F.S., and a Ph.D. grant to O.O.O. by the Izmir Institute of Technology. The mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE<SUP>86,87</SUP> partner repository.en_US
dc.language.isoenen_US
dc.publisherAmerican Chemical Societyen_US
dc.relation.ispartofACS Omegaen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.titlePseudomonas aeruginosa presents multiple vital changes in its proteome in the presence of 3-hydroxyphenylacetic acid, a promising antimicrobial agenten_US
dc.typeArticleen_US
dc.institutionauthorÖzdemir, Özgün O.tr
dc.institutionauthorSoyer, Ferdatr
dc.departmentİzmir Institute of Technology. Molecular Biology and Geneticsen_US
dc.identifier.volume5en_US
dc.identifier.issue32en_US
dc.identifier.startpage19938en_US
dc.identifier.endpage19951en_US
dc.identifier.wosWOS:000563015100003en_US
dc.identifier.scopus2-s2.0-85090988898en_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıtr
dc.identifier.doi10.1021/acsomega.0c00703-
dc.identifier.pmid32832748en_US
dc.relation.doi10.1021/acsomega.0c00703en_US
dc.coverage.doi10.1021/acsomega.0c00703en_US
dc.identifier.wosqualityQ2-
dc.identifier.scopusqualityQ1-
item.grantfulltextopen-
item.openairecristypehttp://purl.org/coar/resource_type/c_18cf-
item.cerifentitytypePublications-
item.openairetypeArticle-
item.languageiso639-1en-
item.fulltextWith Fulltext-
crisitem.author.dept04.03. Department of Molecular Biology and Genetics-
Appears in Collections:Molecular Biology and Genetics / Moleküler Biyoloji ve Genetik
PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection
Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
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