Please use this identifier to cite or link to this item: https://hdl.handle.net/11147/12213
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dc.contributor.authorAkköse Baytar, Asenaen_US
dc.contributor.authorPeynircioğlu, Cengen_US
dc.contributor.authorSezener, Volkanen_US
dc.contributor.authorFrary, Anneen_US
dc.contributor.authorDoğanlar, Samien_US
dc.date.accessioned2022-07-28T09:01:19Z-
dc.date.available2022-07-28T09:01:19Z-
dc.date.issued2022-05-
dc.identifier.urihttps://doi.org/10.1007/s12298-022-01184-6-
dc.identifier.urihttps://hdl.handle.net/11147/12213-
dc.descriptionThis work was supported by a research grant (317O179) from The Scientific and Technological Research Council of Turkeyen_US
dc.description.abstractCotton originated from ancestors in the Gossypium genus that grew in semi-desert habitats. As a result, it is adversely affected by low temperatures especially during germination and the first weeks of growth. Despite this, there are relatively few molecular studies on cold stress in cotton. This limitation may present a future breeding handicap, as recent years have witnessed increased low temperature damage to cotton production. Cold tolerance is a sustainable approach to obtain good production in case of extreme cold. In the present study, 110 Upland cotton (Gossypium hirsutum) genotypes were evaluated for cold tolerance at the germination stage. We identified vigorous genotypes with cold-related parameters that outperformed the panel’s average performance (x¯ = 76.9% CG, 83.9% CSI, 167.5 CWVI). Molecular genetic diversity analysis with 101 simple sequence repeat (SSR) markers yielding 416 loci was used to select tolerant genotypes that could be important materials for breeding this trait. A total of 16 marker-cold tolerance trait associations (p < 0.005) were identified with 10 of them having major effects (PVE > 10%). Based on the positions of these markers, candidate genes for cold tolerance in the G. hirsutum genome were identified. Three of these markers (BNL0569, CIR081 and CIR202) are important candidates for use in marker-assisted breeding for cold tolerance because they mapped to genes previously associated with cold tolerance in other plant species such as Arabidopsis thaliana, rice and tomato.en_US
dc.language.isoenen_US
dc.publisherSpringeren_US
dc.relation.ispartofPhysiology and Molecular Biology of Plantsen_US
dc.rightsinfo:eu-repo/semantics/embargoedAccessen_US
dc.subjectAssociation mappingen_US
dc.subjectCold stress toleranceen_US
dc.subjectGossypium hirsutum L.en_US
dc.subjectSimple sequence repeats (SSRs)en_US
dc.titleAssociation analysis of germination level cold stress tolerance and candidate gene identification in Upland cotton (Gossypium hirsutum L.)en_US
dc.typeArticleen_US
dc.authorid0000-0002-1068-4544en_US
dc.authorid0000-0002-8973-0100en_US
dc.authorid0000-0002-5712-0826en_US
dc.institutionauthorAkköse Baytar, Asenaen_US
dc.institutionauthorFrary, Anneen_US
dc.institutionauthorDoğanlar, Samien_US
dc.departmentİzmir Institute of Technology. Molecular Biology and Geneticsen_US
dc.identifier.wosWOS:000800997700001en_US
dc.identifier.scopus2-s2.0-85130553232en_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.identifier.doi10.1007/s12298-022-01184-6-
dc.identifier.pmid35722519-
dc.contributor.affiliationIzmir Institute of Technologyen_US
dc.contributor.affiliationÖzaltın Agricultural Enterprises Industry and Commerceen_US
dc.contributor.affiliationNazilli Cotton Research Instituteen_US
dc.contributor.affiliationIzmir Institute of Technologyen_US
dc.contributor.affiliationIzmir Institute of Technologyen_US
dc.relation.issn0971-5894en_US
dc.description.volume28en_US
dc.description.issue5en_US
dc.description.startpage1049en_US
dc.description.endpage1060en_US
dc.identifier.scopusqualityQ2-
item.openairetypeArticle-
item.openairecristypehttp://purl.org/coar/resource_type/c_18cf-
item.fulltextWith Fulltext-
item.languageiso639-1en-
item.cerifentitytypePublications-
item.grantfulltextembargo_20250701-
crisitem.author.dept01. Izmir Institute of Technology-
crisitem.author.dept04.03. Department of Molecular Biology and Genetics-
crisitem.author.dept04.03. Department of Molecular Biology and Genetics-
Appears in Collections:Molecular Biology and Genetics / Moleküler Biyoloji ve Genetik
PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection
Scopus İndeksli Yayınlar Koleksiyonu / Scopus Indexed Publications Collection
WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
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