Please use this identifier to cite or link to this item: https://hdl.handle.net/11147/9305
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dc.contributor.authorKochetov, Alex V.-
dc.contributor.authorAllmer, Jens-
dc.contributor.authorKlimenko, Alexandra I.-
dc.contributor.authorZuraev, Bulat S.-
dc.contributor.authorMatushkin, Yury G.-
dc.contributor.authorLashin, Sergey A.-
dc.date.accessioned2020-07-25T22:09:23Z-
dc.date.available2020-07-25T22:09:23Z-
dc.date.issued2017-
dc.identifier.issn1367-4803-
dc.identifier.issn1460-2059-
dc.identifier.urihttps://doi.org/10.1093/bioinformatics/btw736-
dc.identifier.urihttps://hdl.handle.net/11147/9305-
dc.descriptionLashin, Sergey/0000-0003-3138-381X; Klimenko, Alexandra I/0000-0003-1877-9107; Allmer, Jens/0000-0002-2164-7335en_US
dc.descriptionWOS: 000397986500018en_US
dc.descriptionPubMed: 28039164en_US
dc.description.abstractMotivation: Protein synthesis is not a straight forward process and one gene locus can produce many isoforms, for example, by starting mRNA translation from alternative start sites. altORF evaluator (altORFev) predicts alternative open reading frames within eukaryotic mRNA translated by a linear scanning mechanism and its modifications (leaky scanning and reinitiation). The program reveals the efficiently translated altORFs recognized by the majority of 40S ribosomal subunits landing on the 50-end of an mRNA. This information aids to reveal the functions of eukaryotic genes connected to synthesis of either unknown isoforms of annotated proteins or new unrelated polypeptides.en_US
dc.language.isoenen_US
dc.publisherOxford University Pressen_US
dc.relation.ispartofBioinformaticsen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.titleAltORFev facilitates the prediction of alternative open reading frames in eukaryotic mRNAsen_US
dc.typeArticleen_US
dc.institutionauthorAllmer, Jens-
dc.departmentİzmir Institute of Technology. Molecular Biology and Geneticsen_US
dc.identifier.volume33en_US
dc.identifier.issue6en_US
dc.identifier.startpage923en_US
dc.identifier.endpage925en_US
dc.identifier.wosWOS:000397986500018en_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.identifier.doi10.1093/bioinformatics/btw736-
dc.identifier.pmid28039164en_US
dc.relation.doi10.1093/bioinformatics/btw736en_US
dc.coverage.doi10.1093/bioinformatics/btw736en_US
dc.identifier.wosqualityQ1-
dc.identifier.scopusqualityQ1-
item.grantfulltextnone-
item.openairecristypehttp://purl.org/coar/resource_type/c_18cf-
item.cerifentitytypePublications-
item.openairetypeArticle-
item.languageiso639-1en-
item.fulltextNo Fulltext-
crisitem.author.dept04.03. Department of Molecular Biology and Genetics-
Appears in Collections:PubMed İndeksli Yayınlar Koleksiyonu / PubMed Indexed Publications Collection
WoS İndeksli Yayınlar Koleksiyonu / WoS Indexed Publications Collection
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