Browsing by Author Allmer, Jens

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Issue DateTitleAuthor(s)
2016Differential expression of toxoplasma gondii microRNAs in murine and human hostsSaçar Demirci, Müşerref Duygu; Bağcı, Caner; Allmer, Jens 
2017Distinguishing between MicroRNA targets from diverse species using sequence motifs and K-mersYousef, Malik; Khalifa, Waleed; Acar, İlhan Erkin ; Allmer, Jens 
2020DNMSO; an ontology for representing de novo sequencing results from Tandem-MS dataTakan, Savaş ; Allmer, Jens 
2009Enabling the quantitation of post translational modificationsAllmer, Jens 
Dec-2016Enhancement and validation of current human genome annotation via novel proteogenomics algorithmsHas, Canan
Sep-2014EPO mediates neurotrophic, neuroprotective, anti-oxidant, and anti-apoptotic effects via downregulation of miR-451 and miR-885-5p in SH-SY5Y neuron-like cellsAlural, Begüm; Duran, Gizem Ayna; Tüfekçi, Kemal Uğur; Allmer, Jens ; Onkal, Zeynep; Tunalı, Doğa; Genç, Kürşad; Genç, Şermin
2011Evaluation of protein secondary structure prediction algorithms on a new advanced benchmark datasetHas, Canan
Jan-2012Existing bioinformatics tools for the quantitation of post-translational modificationsAllmer, Jens 
2011Exploiting fragment-ion complementarity for peptide de novo sequencing from collision induced dissociation tandem mass spectraAytun, Belgin
Jan-2018The expressed MicroRNA-mRNA interactions of Toxoplasma gondiiAcar, İlhan Erkin ; Saçar Demirci, Müşerref Duygu; Groß, Uwe; Allmer, Jens 
2016Feature selection for microRNA target prediction comparison of one-class feature selection methodologiesYousef, Malik; Allmer, Jens ; Khalifa, Waleed
2016Feature selection has a large impact on one-class classification accuracy for micrornas in plantsYousef, Malik; Demirci, Müşerref Duygu Saçar; Khalifa, Waleed; Allmer, Jens 
2019Gen ifadesinin yeni düzenleyicileri halkasal RNA’ların apoptotik yolaklara olan etkilerinin araştırılmasıAkgül, Bünyamin ; Aldanmaz, Ayten Nalbant ; Allmer, Jens 
2015Genomic simple sequence repeat markers reveal patterns of genetic relatedness and diversity in sesameUncu, Ayşe Özgür; Gültekin, Visam; Allmer, Jens ; Frary, Anne ; Doğanlar, Sami 
2016The impact of feature selection on one and two-class classification performance for plant microRNAsKhalifa, Waleed; Yousef, Malik; Saçar Demirci, Müşerref Duygu; Allmer, Jens 
Dec-2016Importance of database normalization for reliable protein identification in mass spectrometry-based proteomicsMungan, Mehmet Direnç
2017Improving the quality of positive datasets for the establishment of machine learning models for pre-microRNA detectionSaçar Demirci, Müşerref Duygu; Allmer, Jens 
2013An integrative data mining approach for microRNA detection in humanSaçar, Müşerref Duygu
Sep-2014Intersection of MicroRNA and gene regulatory networks and their implication in cancerYousef, Malik; Trinh, Hung V.; Allmer, Jens 
2009Label-free quantitation with 2DBAllmer, Jens