| Issue Date | Title | Author(s) |
| 1 | 2015 | A Cell Division Cycle 7-Related Protein Kinase Inhibitor Suppresses Glioblastoma Cell Growth in Vitro | Erkan, E. P.; Dinç, Melike; Eren, E.; Allmer, Jens ; Yalçın, Talat ; Genç, S. |
| 2 | 2013 | Comparison of Four Ab Initio Microrna Prediction Tools | Saçar, Müşerref Duygu; Allmer, Jens |
| 3 | 2013 | Data Mining for Microrna Gene Prediction: on the Impact of Class Imbalance and Feature Number for Microrna Gene Prediction | Saçar, Müşerref Duygu; Allmer, Jens |
| 4 | 2016 | Database Normalization Is Crucial for Reliable Protein Identification in Mass Spectrometry-Based Proteomics | Has, Canan; Mungan, Mehmet Direnç; Çiftçi, Cansu; Allmer, Jens |
| 5 | 2017 | Distinguishing Between Microrna Targets From Diverse Species Using Sequence Motifs and K-Mers | Yousef, Malik; Khalifa, Waleed; Acar, İlhan Erkin ; Allmer, Jens |
| 6 | 2009 | Enabling the Quantitation of Post Translational Modifications | Allmer, Jens |
| 7 | 2016 | Feature Selection for Microrna Target Prediction Comparison of One-Class Feature Selection Methodologies | Yousef, Malik; Allmer, Jens ; Khalifa, Waleed |
| 8 | 2009 | Label-Free Quantitation With 2db | Allmer, Jens |
| 9 | 2012 | De Novo Markup Language, a Standard To Represent De Novo Sequencing Results From Ms/Ms Data | Takan, Savaş ; Allmer, Jens |
| 10 | 2016 | Preparing Sequence Databases for Application in Proteogenomics | Has, Canan; Mungan, Mehmet Direnç; Çiftçi, Cansu; Allmer, Jens |
| 11 | 2013 | Ranking Tandem Mass Spectra: and the Impact of Database Size and Scoring Function on Peptide Spectrum Matches | Has, Canan; Kundakçı, Cemal Ulaş; Altay, Aybuge; Allmer, Jens |
| 12 | 2010 | Relative Protein Quantitation With Post Translational Modifications in Mass Spectrometry Based Proteomics | Allmer, Jens |
| 13 | 2012 | Removing Contamination From Genomic Sequences Based on Vector Reference Libraries | Bağcı, Caner; Allmer, Jens |
| 14 | 2010 | Systematic Computational Analysis of Potential Rnai Regulation in Toxoplasma Gondii | Çakır, Mehmet Volkan; Allmer, Jens |
